Description Usage Arguments Author(s) References See Also
Internal function. Calculates the immigration rate given the current number of species in the system, the carrying capacity
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 | get_immig_rate(
timeval,
totaltime,
gam,
hyper_pars,
area_pars,
dist_pars,
island_ontogeny,
sea_level,
num_spec,
K,
mainland_n,
trait_pars = NULL,
island_spec = NULL
)
|
timeval |
current time of simulation |
totaltime |
total time of simulation |
gam |
per capita immigration rate |
hyper_pars |
A numeric vector for hyperparameters for the rate calculations:
|
area_pars |
a named list containing area and sea level parameters as
created by
|
dist_pars |
a numeric for the distance from the mainland. |
island_ontogeny |
a numeric describing the type of island ontogeny.
Can be |
sea_level |
a numeric describing sea level can be |
num_spec |
a numeric with the current number of species. |
K |
carrying capacity |
mainland_n |
total number of species present in the mainland |
trait_pars |
A named list containing diversification rates considering
two trait states created by
|
island_spec |
Matrix with current state of simulation containing number of species. |
Pedro Neves, Joshua Lambert
Valente, Luis M., Rampal S. Etienne, and Albert B. Phillimore. "The effects of island ontogeny on species diversity and phylogeny." Proceedings of the Royal Society of London B: Biological Sciences 281.1784 (2014): 20133227.
Other rate calculations:
DAISIE_plot_area()
,
get_ana_rate()
,
get_ext_rate()
,
island_area_vector()
,
island_area()
,
update_max_rates()
,
update_rates()
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