gen_indelmuttype_MMRD: Generate 45 channel indel catalogue
In xqzou/MMRDetect: Mutational Signature-based Classifier for Detecting Mismatch Repair Deficiency in Tumors
Description
Usage
Arguments
Value
View source: R/Gen_catalogues.R
Description
Generate 45 channel indel catalogue
Usage
1
gen_indelmuttype_MMRD(muts_list, Sample_col, muttype_col)
Arguments
muts_list
A list of indels with flanking sequence information: Chrom, Pos, Ref, Alt, Sample column
Sample_col
Sample column name
muttype_col
indel classification column name
Value
Indel catalogue
xqzou/MMRDetect documentation built on April 15, 2021, 8:39 a.m.
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Description Usage Arguments Value
View source: R/Gen_catalogues.R
Description
Generate 45 channel indel catalogue
Usage
1 | gen_indelmuttype_MMRD(muts_list, Sample_col, muttype_col)
|
Arguments
muts_list |
A list of indels with flanking sequence information: Chrom, Pos, Ref, Alt, Sample column |
Sample_col |
Sample column name |
muttype_col |
indel classification column name |
Value
Indel catalogue
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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