blast_extract: Extract the reference genes corresponding to the query genes...
In xvtyzn/interpro2genevis: Package for visualization of gene structures from interproscan and gff results
Description
Usage
Arguments
Value
Description
Extract the reference genes corresponding to the query genes from the blast results
Usage
1
blast_extract(blast_data, bacteria_gene, evalues = 1 * 10^-10)
Arguments
blast_data
a blast tibble using read_blast function
bacteria_gene
List of bacteria genes (result of domain_extract)
evalues
threshold for evalues to filter (default = 1*10^-10)
Value
refenrece gene list coressponding to query genes
xvtyzn/interpro2genevis documentation built on Dec. 23, 2021, 7:14 p.m.
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Description Usage Arguments Value
Description
Extract the reference genes corresponding to the query genes from the blast results
Usage
1 | blast_extract(blast_data, bacteria_gene, evalues = 1 * 10^-10)
|
Arguments
blast_data |
a blast tibble using read_blast function |
bacteria_gene |
List of bacteria genes (result of domain_extract) |
evalues |
threshold for evalues to filter (default = 1*10^-10) |
Value
refenrece gene list coressponding to query genes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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