Man pages for xyang2uchicago/seq2pathway19
a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data

addDescriptionRetrieve "gene description" attributes for gene symbol.
Chipseq_Peak_demochip seq loci data example
dat_chipchip seq data example
dat_RNARNA sequence data example
FisherTest_GO_BP_MF_CCA wrapper function to perform the Fisher's exact test, using...
FisherTest_MsigDBA wrapper function to perform conditional Fisher's exact...
gene2pathway_testA wrapper function to perform gene2pathway test.
GRanges_demoloci information with GRanges format
plotTop10A wrapper function to plot top10 test results.
runseq2geneR wrapped python function to map genomic regions on the...
runseq2pathwayAn function to perform the runseq2pathway algorithm(s).
xyang2uchicago/seq2pathway19 documentation built on April 18, 2019, 9:42 a.m.