matrixNodes: Select nodes and edges from gene regulatory network

Description Usage Arguments Value Examples

View source: R/matrixNodes.R

Description

This function selects nodes and edges from gene regulatory network

Usage

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matrixNodes(M, edgeRank, nodeRank)

Arguments

M

M is a numerical matrix.

edgeRank

edgeRank is the number of non-zero of matrix M.

nodeRank

nodeRank is number of nodes that are needed.

Value

M is a matrix whose number of nodes equals to nodeRank.

Examples

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##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (M, edgeRank, nodeRank)
{
    M <- edges(M, edgeRank)
    matrixNode <- nodes(M, nodeRank)
    return(matrixNode)
  }

xzheng-ac/scPADGRN documentation built on July 26, 2020, 12:41 a.m.