summaryTwoPhase: summaryTwoPhase functions

In yaqicao/TwoPhaseAccuracy: Two-phase stratified sampling and analysis for predicting binary outcomes

Description

summaryTwoPhase functions

Usage

summaryTwoPhase(eval_vec, se_vec, q, p, method)

Arguments

q	threshold value for TPR(q)
p	threshold value for FPR(p)
method	"Benchmark", "ML"
Outcome	vector of length n
X	matrix of size n x t (t standard predictors included in the model)
Z	matrix of size n x m (m biomarkers included in the model); some subjects have NA values
Stratum	vector of length n
Phase_ID	vector of length n
namesX	names of X; vector of length t
namesZ	names of Z; vector of length m
numBoot	number of bootstrap samples

Value

return the summary. TPR,FPR,AUC together with their standard error estimates

Examples

summaryTwoPhase(est_ml, se_ml, q=0.2, p=0.2, method="ML")

yaqicao/TwoPhaseAccuracy documentation built on Dec. 23, 2021, 7:16 p.m.