loadSDFwithName: Load Compound Structures from Four Resources
In yduan004/customCMPdb: Customize and Query Compound Annotation Database
Description
Usage
Arguments
Value
See Also
Examples
Description
This function could be used to get SDFset of compounds in CMAP2, LINCS 2017,
DrugAge build 2 or DrugBank 5.1.5 databases. The cid of the SDFset are
compound names instead of their internal IDs.
Usage
1
loadSDFwithName(source = "LINCS")
Arguments
source
character(1), one of "CMAP2", "LINCS", "DrugBank", "DrugAge"
Value
SDFset object of compounds in the source database, the cid
of the SDFset are compound names.
See Also
Examples
1
da_sdf <- loadSDFwithName(source="DrugAge")
yduan004/customCMPdb documentation built on Feb. 3, 2022, 2:10 p.m.
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Description Usage Arguments Value See Also Examples
Description
This function could be used to get SDFset of compounds in CMAP2, LINCS 2017,
DrugAge build 2 or DrugBank 5.1.5 databases. The cid of the SDFset are
compound names instead of their internal IDs.
Usage
1 | loadSDFwithName(source = "LINCS")
|
Arguments
source |
character(1), one of "CMAP2", "LINCS", "DrugBank", "DrugAge" |
Value
SDFset object of compounds in the source database, the cid
of the SDFset are compound names.
See Also
Examples
1 | da_sdf <- loadSDFwithName(source="DrugAge")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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