Files in yeguanhuav/visual16S
Visualization functions for 16S pipeline

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/construct_lefse_table.R R/construct_otu_table.R R/convert_to_percentage.R R/extract_metadata_phyloseq.R R/log2fc.R R/plot_alpha_diversity.R R/plot_beta_diversity.R R/plot_correlation.R R/plot_sparsity.R R/plot_stacked_bar.R R/track_reads_dada2.R README.Rmd README.md
README_files/figure-markdown_github/Bray-Curtis-1.png
README_files/figure-markdown_github/Chao1-1.png
README_files/figure-markdown_github/Stacked bar plot-1.png
README_files/figure-markdown_github/Stacked barplot 1-1.png
README_files/figure-markdown_github/Stacked barplot 2-1.png
README_files/figure-markdown_github/Stacked barplot 3-1.png
README_files/figure-markdown_github/Stacked barplot 4-1.png
README_files/figure-markdown_github/Stacked barplot 5-1.png
README_files/figure-markdown_github/Stacked barplot 6-1.png
README_files/figure-markdown_github/Stacked barplot-1.png
README_files/figure-markdown_github/correlation 1-1.png
README_files/figure-markdown_github/correlation 2-1.png
README_files/figure-markdown_github/correlation 3-1.png
README_files/figure-markdown_github/correlation 4-1.png
README_files/figure-markdown_github/log2fc 1-1.png
README_files/figure-markdown_github/log2fc 2-1.png
README_files/figure-markdown_github/log2fc 3-1.png
README_files/figure-markdown_github/log2fc-1.png
README_files/figure-markdown_github/reads track-1.png
README_files/figure-markdown_github/sparsity-1.png
README_files/figure-markdown_github/track reads-1.png
data/demo_dada2_result.rda
data/demo_phyloseq_object.rda
data/distinctive_colors.rda
man/construct_lefse_table.Rd man/construct_otu_table.Rd man/convert_to_percentage.Rd man/extract_metadata_phyloseq.Rd man/log2fc.Rd man/plot_alpha_diversity.Rd man/plot_beta_diversity.Rd man/plot_correlation.Rd man/plot_sparsity.Rd man/plot_stacked_bar.Rd man/track_reads_dada2.Rd
visual16S.Rproj
yeguanhuav/visual16S documentation built on Aug. 11, 2019, 8:51 a.m.