HMC.cluster: Run HMC multiple chains in parrellele.
In yfyang86/hamimc: Hybrid Monte Carlo

Description Usage Arguments Details Value Author(s) Examples

View source: R/hamimc.R

Run HMC multiple chains in parrellele.

1	HMC.cluster(nu.chains = 4, iterartion = 10000, startvalue = rep(0, 50))

`nu.chains`	Number of chains
`iterartion`	Number of iterations
`startvalue`	Initial value.

Needs snow

mcmcchain is a mcmc.list in coda and valuechain store the value as a list. In each valuechain[[i]], there is a matrix store the multidimentional simulations.

Yifan Yang

#examples from HMC-clustered:
## Not run: 
system.time(X.flows <- HMC.cluster())
hmc.sum<-summary(X.flows$mcmcchain)
sum(hmc.sum$quantiles[,3]^2)
## End(**Not run**)