Oncomine_datasets_forGenes_Venn: To get studys that research the same Genes

In yikeshu0611/Oncomine: To clear Oncomine Cancer data

Description

You can use this function to get the studys that reasearch the sames Genes. This funtion can not be used in Oncomine web for free. We design 2 styles. First is Venn plot, which can be ploted for no more than 7 Genes. Venn data is the other style, Which is suitable for Genes whiout limitation. We also recomend you to view this data in EXCEL.

Usage

Oncomine_datasets_forGenes_Venn(filesname, Plot = TRUE, data = TRUE,
  cexsn = 1, cexil = 1)

Arguments

filesname	The names of files which contain the data of each Gene. We recomend the file name is identical with Gene.
Plot	Plot is a logical object. TRUE to plot Venn and as defaulted. FALSE refuse to do.
data	data is a logical object. TRUE, as defaulted, to Get Venn data which includes a binary combination and number of study and study name. FALSE refuse to do.
cexsn	to adjust the size of number in venn
cexil	to adjust the size of label beside venn

Value

a dataframe and a venn plot

Author(s)

Jing Zhang

Examples

Oncomine_datasets_forGenes_Venn(c( "ASXL1.txt", "KRAS.txt",  "SF3B1.txt", "TP53.txt" ))

yikeshu0611/Oncomine documentation built on May 30, 2019, 5:01 a.m.