output_sample: Output clinical data from GEO to des dir

In yin-huamin/Dbio: Bioinfo pipeline

Output clinical data from GEO to des dir

Description

Output clinical data from GEO to des dir

Usage

output_sample(sample, sample_post, GEO_name = GEO_name, dir = dir)

Arguments

sample	Sample metadata get from get_sample function
sample_post	Preprocessed sample metadata from preprocess_sample
GEO_name	GSE Number
dir	Des dir

Examples

library(Dbio)
sample <- get_sample("GSE54566", "./")
sample_post <- preprocess_sample(sample)
output_sample(sample, sample_post, "GSE54566", "./")

yin-huamin/Dbio documentation built on April 18, 2022, 4:41 p.m.