ylab-hi/lncGSEA: lncRNA Associated Gene Set Enrichement Analysis

An R Package to infer lncRNA associated pathways from Large-scale cancer transcriptome sequencing data by using two metrics to link gene signatures with a lncRNA expression in tumor patient samples from the TCGA study. It is capable of identifying enriched pathways regulated by lncRNAs in human cancers.

Getting started

Package details

Author c(person(given = "Yanan", family = "Ren", role = c("aut", "cre"), email = "renxx275@umn.edu"), person(given = "Tingyou", family = "Wang", role = "aut", email = "tywang@umn.edu"), person(given = "Leah C.", family = "Anderton", role = "aut", email = "leahcanderton@cedarville.edu"), person(given = "Qi", family = "Cao", role = "aut", email = "qi.cao@northwestern.edu" ), person(given = "Rendong", family = "Yang", role = "aut", email = "yang4414@umn.edu" ) )
MaintainerYanan Ren <renxx275@umn.edu>
LicenseMIT + file LICENCE
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("ylab-hi/lncGSEA")
ylab-hi/lncGSEA documentation built on Aug. 20, 2020, 9:41 a.m.