filter_mean: Filter out low expression genes
In ylab-hi/lncGSEA: lncRNA Associated Gene Set Enrichement Analysis
Description
Usage
Arguments
Value
Description
Filter out low expression genes by mean of FPKM smaller than an cutoff
Usage
1
filter_mean(df, col, cutoff)
Arguments
df
A data frame, rows are genes, columns are samples
col
A integer showing column number, df[[col]] is not considered for filtering
cutoff
A numeric value as expression threshold
Value
A data frame with genes' expression larger than cutoff
ylab-hi/lncGSEA documentation built on Aug. 20, 2020, 9:41 a.m.
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Description Usage Arguments Value
Description
Filter out low expression genes by mean of FPKM smaller than an cutoff
Usage
1 | filter_mean(df, col, cutoff)
|
Arguments
df |
A data frame, rows are genes, columns are samples |
col |
A integer showing column number, df[[col]] is not considered for filtering |
cutoff |
A numeric value as expression threshold |
Value
A data frame with genes' expression larger than cutoff
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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