format_bumps: Convert bumps object to a tibble with additional formatting.
In yocra3/epimutacions: Robust Outlier identification for DNA methylation data
Description
Usage
Arguments
Value
Description
Convert bumps object to a tibble with additional formatting.
Usage
1
format_bumps(bumps, set, sample, method, reduced)
Arguments
bumps
(bumps) Bump object returned by bumphunter.
set
(GenomicRatioSet, ExpressionSet) The dataset on which the bumps
were computed.
sample
(string) The sample name for all the bumps.
reduced
(bool) If True, only return a limited number of columns.
If False, return a full set of columns.
Value
A tibble dataframe where each row is an epimutation.
yocra3/epimutacions documentation built on Jan. 1, 2021, 1:46 p.m.
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Description Usage Arguments Value
Description
Convert bumps object to a tibble with additional formatting.
Usage
1 | format_bumps(bumps, set, sample, method, reduced)
|
Arguments
bumps |
(bumps) Bump object returned by bumphunter. |
set |
(GenomicRatioSet, ExpressionSet) The dataset on which the bumps were computed. |
sample |
(string) The sample name for all the bumps. |
reduced |
(bool) If True, only return a limited number of columns. If False, return a full set of columns. |
Value
A tibble dataframe where each row is an epimutation.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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