run_bumphunter: Run the Bumphunter algorithm.
In yocra3/epimutacions: Robust Outlier identification for DNA methylation data
Description
Usage
Arguments
Value
Description
See bumphunter doc for details.
Usage
1
run_bumphunter(set, design, ...)
Arguments
set
A GenomicRatioSet or ExpressionSet
design
Design matrix with rows representing samples and columns
representing covariates. Regression is applied to each row of set.
...
Extra arguments to pass to bumphunter
Value
The object returned by bumphunter, or if no bumps
are found, a mock bumps object with zero rows returned by empty_bumps.
yocra3/epimutacions documentation built on Jan. 1, 2021, 1:46 p.m.
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Description Usage Arguments Value
Description
See bumphunter doc for details.
Usage
1 | run_bumphunter(set, design, ...)
|
Arguments
set |
A GenomicRatioSet or ExpressionSet |
design |
Design matrix with rows representing samples and columns representing covariates. Regression is applied to each row of set. |
... |
Extra arguments to pass to bumphunter |
Value
The object returned by bumphunter, or if no bumps
are found, a mock bumps object with zero rows returned by empty_bumps.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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