perform_SEM_model0: Run VT-SEM model 0

In yoki5348/VT_SEM: Vertical-Transmission Structural Equation Modeling (VT-SEM)

Description

Run VT-SEM model 0 which assumes there is neither AMnor latent polygenic genetic score(LGS)

Arguments

dat	Data frame which includes offsprings' phenotype value (Yo), haplotypic transmitted PGS from parents (Tm,Tp), and haplotypic non-transmitted PGS of parents (NTm,NTp)

NTmlabel,Tmlabel,NTplabel,Tplabel,Yolabel	Column names of NTm,Tm,NTp,Tp, and Yo.
max.cores	Assign the number of cores to run OpenMx.

Value

AFE.Fit	OpenMx objective which includes fitted results
result_summary	Summaries of fitted values of model 0

Author(s)

Yongkang Kim [e-mail], Jared Balbona, and Matthew C Keller

References

Kong, Augustine, et al. "The nature of nurture: Effects of parental genotypes." Science 359.6374 (2018): 424-428.

Examples

data(equil_exam)
model0=perform_SEM_model0(equil_exam,"NTMO","TMO","NTPO","TPO","Y")
summary(model0$AFE.Fit)
model0$result_summary

yoki5348/VT_SEM documentation built on July 24, 2021, 5:10 p.m.