getfeaturesanova | R Documentation |
Get the features from anova, with p value, q value, rsd and power restriction
getfeaturesanova(
list,
power = 0.8,
pt = 0.05,
qt = 0.05,
n = 3,
ng = 3,
rsdcf = 100,
inscf = 5,
imputation = "l",
index = NULL
)
list |
list with data as peaks list, mz, rt and group information (more than two groups) |
power |
defined power |
pt |
p value threshold |
qt |
q value threshold, BH adjust |
n |
sample numbers in one group |
ng |
group numbers |
rsdcf |
the rsd cutoff of all peaks in all group |
inscf |
Log intensity cutoff for peaks across samples. If any peaks show a intensity higher than the cutoff in any samples, this peaks would not be filtered. default 5 |
imputation |
parameters for 'getimputation' function method |
index |
the index of peaks considered, default NULL |
dataframe with peaks fit the setting above
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