plotLabelReport: Plot isotopologue groups from labeling report

In yufree/x13cms: Untargeted isotope-based metabolomics

Plot isotopologue groups from labeling report

Description

Generates bar plots of ion intensity distribution among the peaks of an isotopologue group

Usage

plotLabelReport(isoLabelReport, intOption = "rel", classes, labeledSamples, outputfile)

Arguments

isoLabelReport	Output of getIsoLabelReport().
intOption	Choice of plotting relative ("rel") or absolute ("abs") ion intensities. Defaults to "rel".
classes	Character vector designating whether each sample is unlabeled (e.g. "C12") or labeled (e.g. "C13")
labeledSamples	character variable designating labeled samples (e.g. "C13")
outputfile	Name of pdf file to which plots are drawn.

Value

Pdf file containing 12 isotopologue group plots per page.

Author(s)

Xiaojing Huang

Examples

## Not run:
## plotLabelReport(labelsControl, "rel", "labelsControlPlots.pdf")

yufree/x13cms documentation built on Feb. 7, 2024, 3:24 p.m.