get_allinf: get_allinf
In yufree/xMSannotator: xMSannotator: R package for network based annotation of metabolomics data.
get_allinf R Documentation
get_allinf
Description
This function allows users to map metabolite/chemical IDs
to additional fields such as KEGG BRITE IDs,
KEGG Pathway IDs, SMPDB IDs, HMDB Status, HMDB
source, etc. depending upon the database.
Usage
get_allinf(dataA,dbname)
Arguments
dataA
data matrix with the first column corresponding to
KEGG or HMDB IDs
dbname
Database name. e.g.: "KEGG", "HMDB", "T3DB"
Value
Returns an object with chemical/metabolite IDs
merged with external IDs, BRITE categories,
pathway IDs, etc.
Author(s)
Karan Uppal
yufree/xMSannotator documentation built on Oct. 31, 2022, 12:20 a.m.
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| get_allinf | R Documentation |
get_allinf
Description
This function allows users to map metabolite/chemical IDs to additional fields such as KEGG BRITE IDs, KEGG Pathway IDs, SMPDB IDs, HMDB Status, HMDB source, etc. depending upon the database.
Usage
get_allinf(dataA,dbname)
Arguments
dataA |
data matrix with the first column corresponding to KEGG or HMDB IDs |
dbname |
Database name. e.g.: "KEGG", "HMDB", "T3DB" |
Value
Returns an object with chemical/metabolite IDs merged with external IDs, BRITE categories, pathway IDs, etc.
Author(s)
Karan Uppal
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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