Files in yufree/xMSannotator
xMSannotator: R package for network based annotation of metabolomics data.

.gitignore
DESCRIPTION
NAMESPACE
R/AnnotationbyMonoIsotopicMass.R R/Annotationbychemical_IDs.R R/Annotationbychemical_IDschild.R R/Annotationbychemical_IDschild_multilevel.R R/Annotationbychemical_IDschildsimple.R R/ChemSpider.annotation.R R/HMDB.Annotation.R R/KEGG.Annotation.R R/KEGG.annotationvold.R R/LipidMaps.Annotation.R R/Metlin.annotation.R R/T3DB.Annotation.R R/check_element.R R/check_element2.R R/check_golden_rules.R R/check_golden_rules2.R R/chspider.batch.annotation.child.R R/compare_intensities_cortest.R R/data_preprocess.R R/doWGCNA.R R/do_eval.R R/do_minmax.R R/docortest.R R/feat.batch.annotation.child.R R/find.Overlapping.mzs.R R/find.Overlapping.mzsvparallel.R R/find.Unique.mzs.R R/getCorchild.R R/getSumreplicates.R R/getSumreplicateschild.R R/getVenn.R R/get_allinf.R R/get_brite_res.R R/get_chemscorev1.6.71.R R/get_confidence_stage2.1.R R/get_confidence_stage2.R R/get_confidence_stage4.R R/get_confidence_stage4v1.5.6.R R/get_kegg_map.R R/get_mz_by_KEGGcompoundIDs.R R/get_mz_by_KEGGdrugIDs.R R/get_mz_by_KEGGpathwayIDs.R R/get_mz_by_KEGGspecies.R R/get_mz_by_monoisotopicmass.R R/get_peak_blocks_cor.R R/get_peak_blocks_graph.R R/get_peak_blocks_hclust.R R/get_peak_blocks_modules.R R/get_peak_blocks_modulesvhclust.R R/getscore.R R/group_by_MDF.R R/group_by_isotopes_v4.R R/group_by_isotopes_vsplit.R R/group_by_massdefect.R R/group_by_massdefect_v4.R R/group_by_massdefectv2.R R/group_by_massdefectv3.R R/group_by_rt.R R/group_by_rt_density.R R/group_by_rt_histv1.R R/group_by_rt_histv2.R R/group_bymassdefect_old.R R/group_bymzisotopes.R R/group_bymzisotopes1.R R/group_bymzisotopes3.R R/group_metabs_prev.R R/moduleEigengenes2.R R/multilevelannotation.R R/multilevelannotationstep2.R R/multilevelannotationstep3.R R/multilevelannotationstep4.R R/multilevelannotationstep5.R R/overlapmzchild.R R/simpleAnnotation.R R/xMSannotator-package.R
README
data/adduct_table.rda
data/adduct_weights.rda
data/customDB.rda
data/customIDs.rda
data/datalist
data/example_data.rda
data/hmdbAllinf.rda
data/hmdbCompMZ.rda
data/keggCompMZ.rda
data/keggotherinf.rda
data/lipidmapsCompMZ.rda
data/t3dbCompMZ.rda
data/t3dbotherinf.rda
man/ChemSpider.annotation.Rd man/HMDB.Annotation.Rd man/KEGG.Annotation.Rd man/KEGG.annotationvold.Rd man/LipidMaps.Annotation.Rd man/Metlin.annotation.Rd man/T3DB.Annotation.Rd man/chspider.batch.annotation.child.Rd man/get_allinf.Rd man/get_brite_res.Rd man/get_kegg_map.Rd man/get_mz_by_KEGGcompoundIDs.Rd man/get_mz_by_KEGGpathwayIDs.Rd man/get_mz_by_KEGGspecies.Rd man/get_mz_by_monoisotopicmass.Rd man/multilevelannotation.Rd man/xMSannotator_1.3.2-package.Rd
yufree/xMSannotator documentation built on May 20, 2018, 3:22 p.m.