segcomparison: Segmentation comparison

In yupingikub/IKUB: Region-Based MR Brain Images Analysis

Description

Displays label segmentation differences in an MR image.

Usage

segcomparison(
  filename_MR,
  filename_seg1,
  filename_seg2,
  Label_No,
  anatomical_plane = 3,
  rowno = 1,
  colno = 1
)

Arguments

filename_MR	A NIfTI-file of an MR image.
filename_seg1	First NIfTI-file of segmentation
filename_seg2	Second NIfTI-file of segmentation
Label_No	One label number for which region is to be displayed
anatomical_plane	1 for coronal plane, 2 for sagittal plane and 3 for transverse plane. Default is 3.
rowno	Number of rows for showing images. Default is 1.
colno	Number of columns for showing images. Default is 1.

Details

Displays label segmentation differences in an MR image for a supplied label number. Region only present in filename_seg 1 is displayed in green color. Region only present in filename_seg2 is displayed in blue color. Region present in both files is displayed in red color.

Value

Label segmentation differences in supplied MR image for supplied label number.

yupingikub/IKUB documentation built on Dec. 23, 2021, 8:20 p.m.