API for yzheng74/permseq
Mapping protein-DNA interactions in highly repetitive regions of the genomes with prior-enhanced read mapping

Global functions
[,Prior-method Man page
[<-,Prior-method Man page
[[,Prior-method Man page
[[<-,Prior-method Man page
aggregate_data Source code
chipMeanCounts Source code
chipMeanCounts_multi Source code
clusterPositions Source code
clusterPositions_3cluster Source code
clusterPositions_histoneonly Source code
constructBins Source code
constructNeucleotideLevelCounts Source code
dnaseProcess Source code
fast.read.table Source code
fitPlot Source code
fitRlm Source code
grplasso_difflambda Source code
histoneProcess Source code
multihistoneProcess Source code
names,Prior-method Man page
permseq Man page
plot,Prior-method Man page
print,Prior-method Man page
priorClass Man page
priorGenerate Man page Source code
priorHistone_init Man page Source code
priorHistone_multi Man page Source code
priorProcess Man page Source code
quantileFunction Source code
readAllocate Man page Source code
refineParameters Source code
run_grplasso Source code
show,Prior-method Man page
summary Source code
summary,Prior-method Man page
yzheng74/permseq documentation built on Aug. 2, 2017, 2:28 p.m.