Man pages for yzheng74/permseq
Mapping protein-DNA interactions in highly repetitive regions of the genomes with prior-enhanced read mapping

permseq_ext-packageMapping protein-DNA interactions in highly repetitive regions...
priorClassAn S4 "Prior" class containing prior information for the...
priorGenerateGenerate prior for ChIP-seq alignment.
priorHistone_initProcess histone ChIP-seq dataset to build the prior without...
priorHistone_multiProcess Histone data to cluster positions.
priorMethods"Prior" class methods
priorProcessProcess DNase-seq (and histone ChIP-seq) datasets
readAllocateAllocate ChIP-seq reads
yzheng74/permseq documentation built on May 4, 2019, 8:47 p.m.