met.corr: asreml-MET corr matrix

In yzhlinscau/AAfun: ASReml-R Added functions

Description

This function calculate var/cov/corr from asreml MET factor analytic results to further research the relation of trial sites.

Usage

met.corr(object, site, faN=1,kn = NULL,plot=TRUE)

Arguments

object	Asreml factor analytic results for MET
site	variable site of data
faN	Factor numbers, 1(default)
kn	Site cluster group numbers, 3(default)
plot	Output cluster figure, TRUE(default)

Value

object	Asreml factor analytic results for MET, met.asr
site	variable site of data, MET$Site
faN	factor numbers,1(default)
kn	cluster group numbers,3(default)
plot	logical value,TRUE(default)

Author(s)

Yuanzhen Lin <[e-mail]>

References

Yuanzhen Lin. R & ASReml-R Statistics. China Forestry Publishing House. 2016

See Also

met.plot met.biplot

Examples

library(asreml)
library(AAfun)
data(MET)
MET$yield<-0.01*MET$yield
  
met.asr<-asreml(yield~Loc, random=~ Genotype:fa(Loc,2), 
              rcov=~ at(Loc):ar1(Col):ar1(Row), 
              data=MET, maxiter=50)
  
met.corr(met.asr,MET$Loc,faN=2,kn=2)

yzhlinscau/AAfun documentation built on May 21, 2020, 2:19 p.m.