| AF.base | Summary of some R basic functions |
| AF.Echidna | Summary of added functions for Echidna |
| AGH.inv | Generate H-inverse matrix for SS-GBLUP. |
| datatable2 | Create an HTML table widget for dataset |
| Echidna.options | Model Qualifiers for Echidna |
| fdata | format dataset |
| fm | fm dataset |
| fs | full-sib dataset |
| GenomicRel | Generate genomic relationship matrix. |
| mc.run | multi-core run in R |
| met | MET analysis |
| model.comp | Model comparison for Echidna. |
| PC.res | output PCs for AMMI analysis |
| pin | Count error for h2 and corr. |
| plot | output model diagnose results |
| PrSpa | Tree spacing trial dataset |
| read.example | read file list |
| read.file | read file function |
| spd.plot | Plot spatial data or Variogram. |
| summary | Summarize an esR object |
| Var | Output Variance components for R packages |
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