makeprimerdb: Create a BLAST Database for Insilico PCR primers
In zachth/RinsilicoPCR:
Description
Usage
Arguments
Value
Examples
Description
Demultiplexes degenerate bases in a set of forward and reverse primers and creates a blast database
Usage
1
makeprimerdb(x)
Arguments
x
a vector or list of length 2 containing a forward primer (5'->3' on plus strand) and reverse primer (5'->3' on minus strand)
Value
String giving the path to the BLAST database
Examples
1
2
primers <- c("GGCTGGATCACCTCCTT","GCCWAGGCATCCDCC")
db <- makeprimerdb(primers)
zachth/RinsilicoPCR documentation built on May 29, 2019, 12:19 p.m.
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Description Usage Arguments Value Examples
Description
Demultiplexes degenerate bases in a set of forward and reverse primers and creates a blast database
Usage
1 | makeprimerdb(x)
|
Arguments
x |
a vector or list of length 2 containing a forward primer (5'->3' on plus strand) and reverse primer (5'->3' on minus strand) |
Value
String giving the path to the BLAST database
Examples
1 2 | primers <- c("GGCTGGATCACCTCCTT","GCCWAGGCATCCDCC")
db <- makeprimerdb(primers)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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