Description Usage Arguments Value Examples
Calculate p-values for each branch in the tree
1 | phclust_pvalues(x, hcl = phclust(x), method = "svd", nperm = 100)
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x |
A data.frame or matrix with one row for each individual |
hcl |
A "hclust" distance object, it will be created if missing. |
method |
Either 'trace' or 'svd', see Park 2009 |
nperm |
The number of permutations to use for predicting branch confidence |
A vector of p-values
1 | phclust_pvalues(iris[1:3], nperm=10)
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