phclust_pvalues: Calculate p-values for each branch in the tree

In zbwrnz/parkcluster: Park's Cluster Significance Algorithm

Description

Calculate p-values for each branch in the tree

Usage

phclust_pvalues(x, hcl = phclust(x), method = "svd", nperm = 100)

Arguments

x	A data.frame or matrix with one row for each individual
hcl	A "hclust" distance object, it will be created if missing.
method	Either 'trace' or 'svd', see Park 2009
nperm	The number of permutations to use for predicting branch confidence

Value

A vector of p-values

Examples

phclust_pvalues(iris[1:3], nperm=10)

zbwrnz/parkcluster documentation built on May 4, 2019, 9:12 p.m.