CallzUMIs: zUMI method used to recognize cell-containing droplets.

In zh542370159/dropSplit: Automatically identify cell-containing and empty droplets for droplet-based scRNAseq data using dropSplit

zUMI method used to recognize cell-containing droplets.

Description

zUMI method used to recognize cell-containing droplets.

Usage

CallzUMIs(counts, Cell_min_nCount = 500)

Arguments

counts	A matrix object or a dgCMatrix object which columns represent features and rows represent droplets.
Cell_min_nCount	Minimum nCount for 'Cell' droplets. Default is 500.

Value

A DataFrame containing the classification column named 'zUMIsClass'.

Examples

counts <- simSimpleCounts()
result <- CallzUMIs(counts)
head(result)

zh542370159/dropSplit documentation built on June 19, 2022, 2:49 p.m.