zhangbaifeng/SplitFusion: Detection of gene fusion based on split alignments
SplitFusion is a companion data pipeline for AMP, for the detection of gene fusion based on split alignments, i.e. reads crossing fusion breakpoints, with the ability to accurately infer in-frame or out-of-frame of fusion partners of a given fusion candidate. SplitFusion also outputs example breakpoint-supporting seqeunces in FASTA format, allowing for further investigations.
Getting started
Browse package contents
Package details |
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| Author | person("Baifeng", "Zhang", email = "baifeng.zhang@ki.se", role = c("aut", "cre")),person("Zongli", "Zheng", email = "zongli.zheng@ki.se", role = c("aut", "cre")) |
| Maintainer | Baifeng Zhang <baifeng.zhang@ki.se> |
| License | GPL |
| Version | 0.1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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