zhangbaifeng/SplitFusion: Detection of gene fusion based on split alignments

SplitFusion is a companion data pipeline for AMP, for the detection of gene fusion based on split alignments, i.e. reads crossing fusion breakpoints, with the ability to accurately infer in-frame or out-of-frame of fusion partners of a given fusion candidate. SplitFusion also outputs example breakpoint-supporting seqeunces in FASTA format, allowing for further investigations.

Getting started

Package details

Authorperson("Baifeng", "Zhang", email = "baifeng.zhang@ki.se", role = c("aut", "cre")),person("Zongli", "Zheng", email = "zongli.zheng@ki.se", role = c("aut", "cre"))
MaintainerBaifeng Zhang <baifeng.zhang@ki.se>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
zhangbaifeng/SplitFusion documentation built on June 18, 2020, 12:18 a.m.