batchMS2Score.optimized: Title batchMS2Score.optimized

View source: R/batchMS2Score.optimized.R

batchMS2Score.optimizedR Documentation

Title batchMS2Score.optimized

Description

Title batchMS2Score.optimized

Usage

batchMS2Score.optimized(
  ms1Info,
  MS1MS2DeltaMZ,
  MS1MS2DeltaTR,
  mgfFilePath,
  MS2DeltaMZ,
  NeedCleanSpectra = T,
  MS2NoiseRemoval = 0.01,
  onlyKeepMax = T,
  minScore = 0.5,
  KeepNotMatched = T,
  cores = 4
)

Arguments

ms1Info

the result of extracResFliter

MS1MS2DeltaMZ

the difference of m/z between ms1Info and mgf files

MS1MS2DeltaTR

the difference of m/z between mgf and database of MS2

cores

The number of CPU cores when computing.

mgfFile

mgf file path

Value

resultList


zhengfj1994/MetEx documentation built on Nov. 19, 2023, 1:34 p.m.