View source: R/batchMS2Score.optimized.R
batchMS2Score.optimized | R Documentation |
Title batchMS2Score.optimized
batchMS2Score.optimized(
ms1Info,
MS1MS2DeltaMZ,
MS1MS2DeltaTR,
mgfFilePath,
MS2DeltaMZ,
NeedCleanSpectra = T,
MS2NoiseRemoval = 0.01,
onlyKeepMax = T,
minScore = 0.5,
KeepNotMatched = T,
cores = 4
)
ms1Info |
the result of extracResFliter |
MS1MS2DeltaMZ |
the difference of m/z between ms1Info and mgf files |
MS1MS2DeltaTR |
the difference of m/z between mgf and database of MS2 |
cores |
The number of CPU cores when computing. |
mgfFile |
mgf file path |
resultList
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