ms2ScoreSpectralEntropy: Title Give MSMS Score using spectral entropy.
In zhengfj1994/MetEx: Targeted extraction from untargeted metabolomics dataset by using metabolomics database
View source: R/ms2ScoreSpectralEntropy.R
ms2ScoreSpectralEntropy R Documentation
Title
Give MSMS Score using spectral entropy.
Description
Title
Give MSMS Score using spectral entropy.
Usage
ms2ScoreSpectralEntropy(
spec_query,
spec_reference,
ms2_da,
need_clean_spectra = TRUE,
noise_removal = 0.01
)
Arguments
spec_query,
measured ms2
spec_reference,
ms2 in database
ms2_da,
the tolerence between ms2Act and ms2DB
Value
scoreOfMS2
References
Li, Y., Kind, T., Folz, J. et al. Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification. Nat Methods 18, 1524–1531 (2021). https://doi.org/10.1038/s41592-021-01331-z
zhengfj1994/MetEx documentation built on Nov. 19, 2023, 1:34 p.m.
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View source: R/ms2ScoreSpectralEntropy.R
| ms2ScoreSpectralEntropy | R Documentation |
Title Give MSMS Score using spectral entropy.
Description
Title Give MSMS Score using spectral entropy.
Usage
ms2ScoreSpectralEntropy(
spec_query,
spec_reference,
ms2_da,
need_clean_spectra = TRUE,
noise_removal = 0.01
)
Arguments
spec_query, |
measured ms2 |
spec_reference, |
ms2 in database |
ms2_da, |
the tolerence between ms2Act and ms2DB |
Value
scoreOfMS2
References
Li, Y., Kind, T., Folz, J. et al. Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification. Nat Methods 18, 1524–1531 (2021). https://doi.org/10.1038/s41592-021-01331-z
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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