copyto.gdsn: Copy GDS nodes

In zhengxwen/gdsfmt: R Interface to CoreArray Genomic Data Structure (GDS) Files

Copy GDS nodes

Description

Copy GDS node(s) to a folder with a new name

Usage

copyto.gdsn(node, source, name=NULL)

Arguments

node	a folder of class gdsn.class or gds.class
source	an object of class gdsn.class or gds.class
name	a specified name; if NULL, it is determined by source

Value

None.

Author(s)

Xiuwen Zheng

See Also

moveto.gdsn

Examples

# cteate a GDS file
f <- createfn.gds("test.gds")

add.gdsn(f, "label", NULL)
add.gdsn(f, "int", 1:100, compress="ZIP", closezip=TRUE)
add.gdsn(f, "int.matrix", matrix(1:100, nrow=20))
addfolder.gdsn(f, "folder1")
addfolder.gdsn(f, "folder2")


for (nm in c("label", "int", "int.matrix"))
    copyto.gdsn(index.gdsn(f, "folder1"), index.gdsn(f, nm))
f

copyto.gdsn(index.gdsn(f, "folder2"), index.gdsn(f, "folder1"))
f

# close the GDS file
closefn.gds(f)


# delete the temporary file
unlink("test.gds", force=TRUE)

zhengxwen/gdsfmt documentation built on April 11, 2024, 3:19 a.m.