insert_bugfile_chunk_noreg_meas: Insert measurement likelihood (without regression) code...

In zhenkewu/baker: "Nested Partially Latent Class Models"

Insert measurement likelihood (without regression) code chunks into .bug model file

Description

Insert measurement likelihood (without regression) code chunks into .bug model file

Usage

insert_bugfile_chunk_noreg_meas(
  k_subclass,
  Mobs,
  prior,
  cause_list,
  use_measurements = "BrS",
  ppd = NULL,
  use_jags = FALSE
)

Arguments

k_subclass	the number of subclasses for the slices that require conditional dependence modeling (only applicable to BrS data); its length is of the same value as the number of BrS slices.
Mobs	measurement data in the form of data_nplcm
prior	prior specification from model_options
cause_list	a list of latent status names (crucial for building templates; see make_template())
use_measurements	"BrS", or "SS"
ppd	Default is NULL; set to TRUE for posterior predictive checking
use_jags	Default is FALSE; set to TRUE if want to use JAGS for model fitting.

Value

a long character string to be inserted into .bug model file as measurement likelihood

See Also

It is used in write_model_NoReg for constructing a .bug file along with specification of latent status distribution (insert_bugfile_chunk_noreg_etiology)

zhenkewu/baker documentation built on May 6, 2024, 11:19 p.m.