insert_bugfile_chunk_reg_nonest_meas: Insert measurement likelihood (with regression) code chunks...

In zhenkewu/baker: "Nested Partially Latent Class Models"

Insert measurement likelihood (with regression) code chunks into .bug model file

Description

Insert measurement likelihood (with regression) code chunks into .bug model file

Usage

insert_bugfile_chunk_reg_nonest_meas(
  Mobs,
  prior,
  cause_list,
  FPR_formula,
  use_measurements = "BrS",
  ppd = NULL,
  use_jags = FALSE
)

Arguments

Mobs	Measurement data in the form of data_nplcm
prior	Prior specification from model_options
cause_list	A list of latent status names (crucial for building templates; see make_template())
FPR_formula	A list of FPR regression formula; check model_options$likelihood$FPR_formula
use_measurements	"BrS", or "SS"
ppd	Default is NULL; set to TRUE for posterior predictive checking
use_jags	Default is FALSE; set to TRUE if want to use JAGS for model fitting.

Value

A long character string to be inserted into .bug model file as measurement likelihood

See Also

It is used in write_model_Reg_NoNest for constructing a .bug file along with specification of latent status regression (insert_bugfile_chunk_reg_etiology)

zhenkewu/baker documentation built on Feb. 7, 2024, 4:20 p.m.