Global functions | |
---|---|

AddAPCluster | Source code |

CalculateCountLog2FC | Source code |

CalculateRand | Source code |

CombineMean | Source code |

CombinePvalue | Source code |

CombinePvalueMethods | Source code |

CreateClReport | Source code |

CreateDdReport | Source code |

CreateDeReport | Source code |

CreateOiReport | Source code |

CrossPlatformDE | Source code |

DeAbsSeq | Source code |

DeAldex2 | Source code |

DeBBSeq | Source code |

DeBGmix | Source code |

DeBader | Source code |

DeBallgown | Source code |

DeBaySeq | Source code |

DeBridge | Source code |

DeDeSeq | Source code |

DeDeSeq2 | Source code |

DeDegSeq | Source code |

DeDexus | Source code |

DeEbSeq | Source code |

DeEdgeR | Source code |

DeEdgeRun | Source code |

DeGPseq | Source code |

DeLMGene | Source code |

DeLimma | Source code |

DeMetaseqR | Source code |

DeMethods | Source code |

DeNBPSeq | Source code |

DeNoiSeq | Source code |

DePlgem | Source code |

DePoissonSeq | Source code |

DeRBM | Source code |

DeRNAseq | Source code |

DeRNAseqMethods | Source code |

DeRankP | Source code |

DeRankProd | Source code |

DeSSeq | Source code |

DeSam | Source code |

DeSamSeq | Source code |

DeT | Source code |

DeTSPM | Source code Source code |

DeTweeDeSeq | Source code |

DeVoomLimma | Source code |

DeWelch | Source code |

DeWilcoxon | Source code |

DeWrapper | Source code |

DegHeatmap | Source code |

DegPCA | Source code |

DegPCA2Groups | Source code |

FilterByNN | Source code |

GSEAviaJava | Source code |

GeneList2Datatable | Source code |

GeneList2HTML | Source code |

GsaWrapper | Source code |

GseaHeatmap | Source code |

GseaKegg | Source code |

NormAffyConstant | Source code |

NormAffyLoess | Source code |

NormAffyQspline | Source code |

NormCyclicLoess | Source code |

NormDESeq | Source code |

NormFPKM | Source code |

NormLinear | Source code |

NormLoess | Source code |

NormMedian | Source code |

NormMethods | Source code |

NormQQ | Source code |

NormRLE | Source code |

NormRlog | Source code |

NormTMM | Source code |

NormTPM | Source code |

NormTotalCount | Source code |

NormUpperQuantile | Source code |

NormVST | Source code |

NormWrapper | Source code |

NormalizeRNAseq | Source code |

OptimizeClustering | Source code |

OraWrapper | Source code |

OutputDe | Source code |

PCALegend | Source code |

PrepareDe | Source code |

PrepareGSEA | Source code |

RunningRank | Source code |

SummarizeGSEA | Source code |

SummarizePiano | Source code |

SummarizeRP | Source code |

SummarizeStatCl | Source code |

VoomLimma | Source code |

WriteExcel | Source code |

WriteExcelSheet | Source code |

generalized.poisson.likelihood | Source code |

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