geneclusters: geneclusters: get the cluster information of a certain...

In zhilongjia/cogena: co-expressed gene-set enrichment analysis

geneclusters: get the cluster information of a certain clustering method with a certain number.

Description

geneclusters: get the cluster information of a certain clustering method with a certain number.

Usage

geneclusters(object, method, nClust)

## S4 method for signature 'genecl'
geneclusters(object, method = clusterMethods(object), nClust)

## S4 method for signature 'cogena'
geneclusters(object, method = clusterMethods(object), nClust)

Arguments

object	a genecl or cogena object
method	as clMethods in genecl function
nClust	cluster numbers

Value

geneclusters: a list or hclust depends on the method

Examples

## Not run: 
geneclusters(genecl_result, "kmeans", 3)
geneclusters(genecl_result, "hierarchical", 4)

## End(Not run)

zhilongjia/cogena documentation built on Nov. 21, 2023, 1:34 a.m.