R/data.R

In zhouhj1994/LinDA: Linear model for differential abundance analysis

#' Smoking effect on the human upper respiratory tract 
#'
#' A dataset containing "otu", "tax", meta", "genus", family"
#' Reference: Charlson et al. (2010). Disordered microbial communities in the upper 
#' respiratory tract of cigarette smokers.
#' 
#' @format A  list with elements
#' \describe{
#'   \item{otu}{otu table, 2156 taxa by 290 samples}
#'   \item{tax}{taxonomy table, 2156 taxa by 7 taxonomic ranks}
#'   \item{meta}{meta table, 290 samples by 53 sample variables}
#'   \item{genus}{304 by 290}
#'   \item{family}{113 by 290}
#' }
#' @source \url{https://qiita.ucsd.edu/} study ID:524
"smokers"