zunderlab/FLOWMAP: Graph-based visualizations of high-dimensional single-cell data across time
An Implementation of FLOW-MAP Algorithm in R. It takes user-specified inputs for settings of a FLOW-MAP analysis and generates a FLOW-MAP graph from provided FCS files or dataframes. Results include graphml files for the FLOW-MAP graph as well as a graph resolved by a force-directed layout, as well as auto-generated PDFs for the resolved graph colored by each node parameter. A summary text file is autogenerated to summarize the settings of a particular run. A Shiny GUI is also available to establish FLOW-MAP settings and begin a FLOW-MAP analysis. Please see the accompanying README.md file and our GitHub repo for more detailed instructions and examples.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | GNU General Public License v3 (GPL-3) |
| Version | 1.2.0 |
| URL | https://github.com/zunderlab/FLOWMAP/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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