as_phyloseq: Coerce a SummarizedExperiment object to a phyloseq object
In waldronlab/HMP16SData: 16S rRNA Sequencing Data from the Human Microbiome Project
as_phyloseq R Documentation
Coerce a SummarizedExperiment object to a phyloseq object
Description
The phyloseq-package provides a suite of methods for
working with 16S rRNA sequencing and other microbiome data that may be of use
to the users of HMP16SData. The as_phyloseq method
provides a means to easily coerce a
SummarizedExperiment-class object to a
phyloseq-class object.
Usage
as_phyloseq(x)
Arguments
x
A SummarizedExperiment-class
object from the HMP16SData package
Value
A phyloseq-class object
Examples
V13() %>%
as_phyloseq()
waldronlab/HMP16SData documentation built on Oct. 26, 2023, 5:42 a.m.
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| as_phyloseq | R Documentation |
Coerce a SummarizedExperiment object to a phyloseq object
Description
The phyloseq-package provides a suite of methods for
working with 16S rRNA sequencing and other microbiome data that may be of use
to the users of HMP16SData. The as_phyloseq method
provides a means to easily coerce a
SummarizedExperiment-class object to a
phyloseq-class object.
Usage
as_phyloseq(x)
Arguments
x |
A |
Value
A phyloseq-class object
Examples
V13() %>%
as_phyloseq()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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