yaml_to_env: Create conda env from yaml file
In RajLabMSSM/echoconda: echoverse module: conda environment management

yaml_to_env

R Documentation

Create conda env from yaml file

Description

Create a conda environment from a yaml file. By default, creates the "echoR" conda env to support echolocatoR.

Usage

yaml_to_env(
  yaml_path = system.file(package = "echoconda", "conda", "echoR_mini.yml"),
  method = c("basilisk", "reticulate"),
  conda = "auto",
  force_new = FALSE,
  show_contents = FALSE,
  verbose = TRUE,
  ...
)

Arguments

`yaml_path`	Path to local or remote yaml file with conda build specifications.
`method`	Method to use to create the conda env: "basilisk" : Uses the R package basilisk. "reticulate" : Uses the R package reticulate. "cli" : Uses a custom wrapper for conda's command line interface.
`conda`	The path to a `conda` executable. Use `"auto"` to allow `reticulate` to automatically find an appropriate `conda` binary. See Finding Conda and `conda_binary()` for more details.
`force_new`	If the conda env already exists, overwrite it with a new one (DEFAULT: `FALSE`).
`show_contents`	Show the contents of the yaml file (if used).
`verbose`	Print messages.
`...`	Additional arguments passed to method-specific conda env build functions: `basilisk`: create_env_basilisk `reticulate`: conda_create `cli`: create_env_cli