| geom_brain | R Documentation |
A ggplot2 geom for rendering brain atlas regions as filled polygons, built on top of [ggplot2::geom_sf()]. Accepts a 'brain_atlas' object and automatically joins user data to atlas geometry for visualisation.
geom_brain(
mapping = aes(),
data = NULL,
atlas,
hemi = NULL,
view = NULL,
position = position_brain(),
show.legend = NA,
inherit.aes = TRUE,
...
)
mapping |
Set of aesthetic mappings created by [ggplot2::aes()]. |
data |
A data.frame containing variables to map. If 'NULL', the atlas is plotted without user data. |
atlas |
A 'ggseg_atlas' object (e.g. 'dk()', 'aseg()', 'tracula()'). |
hemi |
Character vector of hemispheres to include (e.g. '"left"', '"right"'). Defaults to all hemispheres in the atlas. |
view |
Character vector of views to include, as recorded in the atlas data. For cortical atlases: '"lateral"', '"medial"'. For subcortical/tract atlases: slice identifiers like '"axial_3"'. Defaults to all views. |
position |
Position adjustment, either as a string or the result of a call to [position_brain()]. |
show.legend |
Logical. Should this layer be included in the legends? |
inherit.aes |
Logical. If 'FALSE', overrides the default aesthetics rather than combining with them. |
... |
Additional arguments passed to [ggplot2::geom_sf()]. |
A list of ggplot2 layer and coord objects.
'GeomBrain' is a [ggplot2::Geom] ggproto object that handles rendering of brain atlas polygons. It is used internally by [geom_brain()] and should not typically be called directly.
library(ggplot2)
ggplot() +
geom_brain(atlas = dk())
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