get_tree_amphibian_n100: Get 100 randomly selected mega-trees of Amphibians from...
In megatrees: Subsets of Randomly Selected Phylogenies from Existing Mega-Phylogenies
View source: R/get_large_trees.R
get_tree_amphibian_n100 R Documentation
Get 100 randomly selected mega-trees of Amphibians from VertLife
Description
The first tree is the "consensus" tree; the remaining 99 are posterior
phylogenies. Because of the large file size (~12 MB), this dataset is not
bundled with the package and is downloaded and cached locally on first use.
Usage
get_tree_amphibian_n100(force = FALSE)
Arguments
force
Logical. Re-download even if a local cache exists. Default FALSE.
Value
A multiPhylo object. Each phylogeny also has a data frame
genus_family_root with root node information for every unique genus
and family, usable for inserting new tips onto the phylogeny.
Source
http://vertlife.org/data/amphibians/
References
Jetz, W., & Pyron, R. A. (2018). The interplay of past
diversification and evolutionary isolation with present imperilment across
the amphibian tree of life. Nature ecology & evolution, 2(5), 850-858.
megatrees documentation built on June 29, 2026, 5:06 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/get_large_trees.R
| get_tree_amphibian_n100 | R Documentation |
Get 100 randomly selected mega-trees of Amphibians from VertLife
Description
The first tree is the "consensus" tree; the remaining 99 are posterior phylogenies. Because of the large file size (~12 MB), this dataset is not bundled with the package and is downloaded and cached locally on first use.
Usage
get_tree_amphibian_n100(force = FALSE)
Arguments
force |
Logical. Re-download even if a local cache exists. Default FALSE. |
Value
A multiPhylo object. Each phylogeny also has a data frame
genus_family_root with root node information for every unique genus
and family, usable for inserting new tips onto the phylogeny.
Source
http://vertlife.org/data/amphibians/
References
Jetz, W., & Pyron, R. A. (2018). The interplay of past diversification and evolutionary isolation with present imperilment across the amphibian tree of life. Nature ecology & evolution, 2(5), 850-858.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.