Description Usage Arguments Details Value Author(s) Examples
All available ontology names
1 2 | ## S4 method for signature 'GreatJob'
availableOntologies(job, category = NULL)
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job |
a |
category |
one or multiple categories. All available categories can be get by |
The values of the supported ontologies sometime change. You should run the function to get the real-time values. The meaning of ontology returned is quite self-explained by the name.
The returned values is a vector of ontologies.
Zuguang gu <z.gu@dkfz.de>
1 2 3 4 | # note the `job` was generated from GREAT 3.0.0
job = readRDS(system.file("extdata", "job.rds", package = "rGREAT"))
availableOntologies(job)
availableOntologies(job, category = "Pathway Data")
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