join_transcripts: Add differential transcription information to a tbl using...
In tidySingleCellExperiment: Brings SingleCellExperiment to the Tidyverse

join_transcripts() extracts and joins information for specific transcripts

join_transcripts(
  .data,
  transcripts = NULL,
  all = FALSE,
  exclude_zeros = FALSE,
  shape = "long"
)

`.data`	A tidy SingleCellExperiment object
`transcripts`	A vector of transcript identifiers to join
`all`	If TRUE return all
`exclude_zeros`	If TRUE exclude zero values
`shape`	Format of the returned table "long" or "wide"

\lifecycle

experimental

This function extracts information for specified transcripts and returns the information in either long or wide format.

A 'tbl' containing the information.for the specified transcripts

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tidySingleCellExperiment::pbmc_small %>%
    tidy() %>%
    join_transcripts(transcripts=c("HLA-DRA", "LYZ"))

tidySingleCellExperiment documentation built on Nov. 8, 2020, 6:54 p.m.

tidySingleCellExperiment index

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