aci | A/Ci curves |
annualDB | Miscanthus dry biomass data. |
aq | A/Q curves |
BioCro-internal | Internal BioCro functions |
BioGro | Biomass crops growth simulation |
c3CanA | Simulates canopy assimilation for C3 canopies |
c3photo | Simulates C3 photosynthesis |
c4photo | Coupled photosynthesis-stomatal conductance simulation |
CanA | Simulates canopy assimilation |
Century | This function implements the Century model from Parton. |
cmi | Weather data for Champaign Illinois |
cmi0506 | Weather data |
cmiWet | Weather data |
doy124 | Weather data |
eC4photo | C4 photosynthesis simulation (von Caemmerer model) |
eCanA | Simulates canopy assimilation (von Caemmerer model) |
EngWea94i | Weather data corresponding to a paper by Clive Beale (see... |
EngWea94rf | Weather data corresponding to a paper by Clive Beale (see... |
idbp | Initial Dry Biomass Partitioning Coefficients |
LayET | Weather data |
lightME | Simulates the light macro environment |
MaizeGro | Simulation of Maize, Growth, LAI, Photosynthesis and... |
MCMCBioGro | Simulated Annealing and Markov chain Monte Carlo for... |
MCMCc4photo | Markov chain Monte Carlo for C4 photosynthesis parameters |
MCMCEc4photo | Markov chain Monte Carlo for C4 photosynthesis parameters |
mOpc3photo | Multiple optimization of assimilation (or stomatal... |
mOpc4photo | Multiple optimization of C4 photosynthesis. |
obsBea | Miscanthus assimilation field data |
obsBeaC | Complete Miscanthus assimilation field data |
obsNaid | Miscanthus assimilation data |
OpBioGro | Optimization of dry biomass partitioning coefficients. |
Opc3photo | Optimize parameters of the C3 photosynthesis model. |
Opc4photo | Optimization of C4 photosynthesis parameters |
OpEC4photo | Optimization of C4 photosynthesis parameters (von Caemmerer... |
plotAC | Plotting function for A/Ci curves |
plot.BioGro | Plotting function for BioGro objects |
plot.MCMCBioGro | Plotting function fo the MCMCBioGro class |
plot.MCMCc4photo | Plotting function for MCMCc4photo objects |
plot.MCMCEc4photo | Plottin function for MCMCEc4photo objects |
print.MCMCEc4photo | Print an MCMCEc4photo object |
print.OpBioGro | Print an OpBioGro object |
print.OpEC4photo | Print an OpEC4photo object |
Rmiscanmod | RUE-based model to calculate miscanthus growth and yield. |
RsqC4photo | R-squared for C4 photosynthesis simulation (Collatz model) |
RsqEC4photo | R-squared for C4 photosynthesis simulation (von Caemmerer... |
RssBioGro | Residual sum of squares for BioGro. |
RUEmod | Radiation use efficiency based model |
RUEmodMY | Radiation use efficiency based model |
simDat2 | Simulated biomass data. |
SoilEvapo | Soil Evaporation |
soilML | soil multi-layered |
sunML | Sunlit shaded multi-layer model |
valid_dbp | Validate dry biomass partitioning coefficients |
WD1979 | Randomly picked dataset from the Illinois area from 1979 |
weach | Simulates the hourly conditions from daily |
weach_imn | Weather change Iowa Mesonet |
wtrstr | Simple function to illustrate soil water content effect on... |
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