Description Usage Arguments Details Value See Also Examples
Powerful plotting function to make a variety of plots regarding the
MCMCBioGro
class (output). It plots the residual sum of square
progression, observed vs. fitted, residuals vs. fitted, trace of the
coefficients and density.
1 2 3 4 |
x |
Object of class |
x2 |
Optional object of class |
x3 |
Optional object of class |
plot.kind |
Kind of plot. See details. |
type |
Point of line as in |
coef |
Whether to plot dry biomass partitioning coeficients (2) or Vmax and alpha (1). |
cols |
Colors. Modify if they don't suit you. |
... |
Additional arguments passed to the underlying
|
Kind of plots that can be produced
rss: Residual Sum of Squares progression. OF: Observed vs. Fitted RF: Residual vs. Fitted OFT: Observed and Fitted with thermal time as the x-axis. trace: trace for the parameters density: density for the parameters
To choosing a subset of the 24 dry biomass partitioning coefficients
use the subset option as you would in the xyplot using nams as the
name. For example,
plot(x,plot.kind="trace",subset=nams=="kLeaf_1")
will select it
for the leaf at the first phenological stage.
A lattice
plot.
1 | ## See the MCMCBioGro function
|
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