Files in CloneSeeker

Seeking and Finding Clones in Copy Number and Sequencing Data

NAMESPACE

DESCRIPTION

TODO

R/sysdata.rda

R/oldNames.R R/00-generics.R R/04-algorithm.R R/03-utlilities.R R/02-simulate.R R/01-cloneMaker.R

inst/doc/CloneSeeker.Rnw

inst/doc/CloneSeeker.pdf inst/doc/CloneSeeker.R inst/auxiliary/running.R inst/auxiliary/figures.R

inst/auxiliary/stash.Rda

inst/auxiliary/clinical.R inst/auxiliary/cnv_survival.R inst/auxiliary/simgen.R inst/auxiliary/assessing.R inst/auxiliary/README.md

inst/auxiliary/chlens.txt

inst/auxiliary/makeChlens.R

build/vignette.rds

tests/test04-algorithm.R tests/test02-WV.R

tests/test01-Simplex.Rout.save

tests/test04-algorithm.Rout.save

tests/test03-simulate.Rout.save

tests/test01-Simplex.R tests/test03-simulate.R

tests/test02-WV.Rout.save

vignettes/CloneSeeker.Rnw

man/03-Tumor.Rd man/01-simplex.Rd man/02-WeightVector.Rd man/04-simulate.Rd man/05-findClones.Rd

CloneSeeker documentation built on July 29, 2026, 3:12 a.m.