DClusterm: Model-based detection of disease clusters

Model-based methods for the detection of disease clusters.

Author
Virgilio Gomez-Rubio, Paula Esther Moraga Serrano, Barry Rowlingson
Date of publication
2016-11-23 17:01:05
Maintainer
Virgilio Gomez-Rubio <virgilio.gomez@uclm.es>
License
GPL-3
Version
0.1

View on R-Forge

Man pages

brainNM
Brain cancer in New Mexico, USA, 1973-1991.
CalcStatClusterGivenCenter
Calls the function to obtain the cluster with the maximum...
CalcStatsAllClusters
Obtains the clusters with the maximum log-likelihood ratio or...
computeprob
Computes the probability that a model parameter is <=k from...
CreateGridDClusterm
Creates grid over the study area.
DetectClustersModel
Detects clusters and computes their significance.
get.stclusters
Gets areas in a spatio-temporal cluster This function is...
glmAndZIP.iscluster
Obtains the cluster with the maximum log-likelihood ratio or...
knbinary
Constructs data frame with clusters in binary format.
mergeknclusters
Merges clusters so that they are identifed as levels of a...
Navarre
Brain cancer in males in Navarre, Spain, 1988-1994.
NY8
Leukemia in an eight-county region of upstate New York,...
PlotClustersNoOverlap
Plots the clusters that do not overlap.
SelectStatsAllClustersNoOverlap
Removes the overlapping clusters.
SetVbleCluster
Constructs a variable that indicates the locations and times...

Files in this package

DClusterm/DESCRIPTION
DClusterm/NAMESPACE
DClusterm/R
DClusterm/R/Functions1PAU.R
DClusterm/R/Functions2PAU.R
DClusterm/R/glm.isclusterPAU.R
DClusterm/R/knutils.R
DClusterm/build
DClusterm/build/vignette.rds
DClusterm/data
DClusterm/data/NY8.RData
DClusterm/data/Navarre.RData
DClusterm/data/brainNM.RData
DClusterm/inst
DClusterm/inst/doc
DClusterm/inst/doc/jss_paper.R
DClusterm/inst/doc/jss_paper.Rnw
DClusterm/inst/doc/jss_paper.pdf
DClusterm/inst/samples
DClusterm/inst/samples/ExamplePAU.R
DClusterm/man
DClusterm/man/CalcStatClusterGivenCenter.Rd
DClusterm/man/CalcStatsAllClusters.Rd
DClusterm/man/CreateGridDClusterm.Rd
DClusterm/man/DetectClustersModel.Rd
DClusterm/man/NY8.Rd
DClusterm/man/Navarre.Rd
DClusterm/man/PlotClustersNoOverlap.Rd
DClusterm/man/SelectStatsAllClustersNoOverlap.Rd
DClusterm/man/SetVbleCluster.Rd
DClusterm/man/brainNM.Rd
DClusterm/man/computeprob.Rd
DClusterm/man/get.stclusters.Rd
DClusterm/man/glmAndZIP.iscluster.Rd
DClusterm/man/knbinary.Rd
DClusterm/man/mergeknclusters.Rd
DClusterm/vignettes
DClusterm/vignettes/DClusterm.bib
DClusterm/vignettes/jss.bst
DClusterm/vignettes/jss.cls
DClusterm/vignettes/jss_paper.Rnw
DClusterm/vignettes/jsslogo.jpg