AIC | Akaike information criterion (AIC) method |
apply | Method apply |
Arith | Arithmetic methods for FLQuant objects |
as.data.frame | Method as.data.frame |
asOld | Old S3 coercion methods |
BIC | Bayesian information criterion (BIC) method |
bkey | Generate key for bubbles plot |
bubbles | Bubbles plot |
catchNames | Method catchNames |
ccplot | Catch-curves plot |
coerce | Method coerce |
computeCatch | Methods to compute total catch, landings, discards and stock... |
createFLAccesors | Create accesor methods for a given class |
cv | Coefficient of Variation of FLR objects with multiple... |
data | FLCore datasets |
dimnames | Modify dimnames of an FLQuant |
dims | List with information on object dimensions |
expand | Trim FLR objects using named dimensions |
Extract | Extract or Replace Parts of an FLR Object |
fbar | Calculates mean harvest rate or fishing mortality |
FLArray-class | Class FLArray |
FLBiol-class | Class FLBiol |
FLBiols-class | Class FLBiols |
flc2flq | Coerce FLCohort into FLQuant. |
FLCatch-accessors | Accesor and replacement methods for the FLCatch class |
FLCatch-class | Class FLCatch |
FLCatches-class | Class FLCatches |
FLCohort-class | Class FLCohort |
FLCohorts-class | Class FLCohorts |
FLComp-class | Class FLComp |
FLCore-accesors | Accesor and replacement methods for complex S4 classes |
FLCore-internal | FLCore-internal |
FLCore-package | Core package of FLR, fisheries modelling in R. |
FLFleet-class | Class FLFleet |
FLFleets-class | Class FLFleets |
FLIndex-class | Class FLIndex |
FLIndices-class | Class FLIndices |
FLlst-class | Class FLlst |
FLMetier-class | Class FLMetier |
FLMetiers-class | Class FLMetiers |
FLModel-class | Class FLModel for statistical models |
FLPar-class | Class FLPar |
FLQuant-class | FLQuant class for numerical data |
FLQuantPoint-accesors | Method lowq |
FLQuantPoint-class | Class FLQuantPoint |
FLQuants-class | Class FLQuants |
FLQuantSums | Methods to compute sums, means and vars of FLQuant objects |
FLQuantTotals | Method quantTotals |
FLSR-class | Class FLSR |
FLStock-class | Class FLStock |
FLStocks-class | Class FLStocks |
FLtest | FLtest functions for running simple units tests |
fmle | Method fmle |
harvest | Harvest calculations for FLBiol |
IOfunctions | Input/Output of FLR objects |
is.FL | Methods to determine the class of a given object |
iter | Select or modify iterations of an FLR object |
iters | Method iters |
jacknife | Jacknife resampling |
lapply | Method lapply |
lattice | Lattice plots |
leslie | Method for calculating Leslie matrix dynamics of an FLBiol... |
limits | Methods upper and lower |
lowess | Method lowess |
mcf | Method mcf |
mean | Method mean |
mean.lifespan | Method for calculating mean lifespan, given the natural... |
median | Method median |
mergeFL | Merging FLStock objects |
metier | Method metier |
model.frame | Method model.frame |
names | Method names |
nls | Method nls |
plot | Method plot |
predict | Method predict |
Method print | |
propagate | Extend an FLQuant along the iter dimension |
pv | Population variability |
qapply | Method qapply |
quant | Method quant |
quantile | Method quantile |
r | Intrinsic rate of increase from an FLBiol object |
range | Method range |
revenue | Method revenue |
rgamma | Method rgamma |
rlnorm | Method rlnorm |
rnorm | Method rnorm |
rpois | Method rpois |
sd | Standard deviation of an FLModel object |
setPlusGroup | Method setPlusGroup |
show | Method show |
sop | Calculates the sum of products correction |
splom | Method splom |
spr0 | Method spr0 |
sr | Stock-recruitment model function |
SRModelName | Convenience function to identify an SR model by its formula |
SRModels | Stock-Recruitment models |
ssb | Method ssb |
ssbpurec | Method ssbpurec |
ssn | Method ssn |
summary | Method summary |
survprob | Calculating survival probabilties given mortality in the... |
sweep | Sweep out FLQuant Summaries |
transform | Transform elements of a complex FLR object |
trim | Trim FLR objects using named dimensions |
units | units attribute for FLQuant objects |
update | Method update |
var | Variance of an FLPar |
window | Extract time (year) windows of an FLR object |
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